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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009130 chr22:49414658 C/T LOC284900 chr22:28315364-28404267:+ -0.46 -6.29 7.0E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T LZTR1 chr22:21333751-21353327:+ -0.68 -7.78 4.47E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T MAPK1 chr22:22108789-22221970:- -0.49 -7.15 3.22E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T MCAT chr22:43528212-43539400:- -0.64 -8.89 1.21E-17 Box Plot
THCA rs6009130 chr22:49414658 C/T MED15 chr22:20850200-20941919:+ -0.43 -6.42 3.37E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T MKL1 chr22:40806285-41032706:- -0.59 -6.84 2.39E-11 Box Plot
THCA rs6009130 chr22:49414658 C/T MPST chr22:37415676-37425863:+ -0.47 -5.97 4.73E-9 Box Plot
THCA rs6009130 chr22:49414658 C/T MTMR3 chr22:30279144-30426855:+ -0.54 -6.39 3.93E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T NCAPH2 chr22:50946645-50961901:+ -0.65 -7.7 7.77E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T NDUFA6 chr22:42481529-42486959:- -0.52 -6.36 4.65E-10 Box Plot
THCA rs6009130 chr22:49414658 C/T NF2 chr22:29999545-30094587:+ -0.65 -7.07 5.45E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T NHP2L1 chr22:42069934-42086508:- -0.62 -7.11 4.14E-12 Box Plot
THCA rs6009130 chr22:49414658 C/T NIPSNAP1 chr22:29950797-29977326:- -0.85 -7.89 2.01E-14 Box Plot
THCA rs6009130 chr22:49414658 C/T NOL12 chr22:38077680-38089485:+ -0.55 -8.11 4.32E-15 Box Plot
THCA rs6009130 chr22:49414658 C/T NUP50 chr22:45559722-45583896:+ -0.66 -7.73 6.18E-14 Box Plot